import warnings
warnings.filterwarnings('ignore',
message=r'Module .*? is being added to sys\.path', append=True)ここに書いてありました:
http://lucumr.pocoo.org/2008/2/19/sick-of-pkg-resources-warnings
import warnings
warnings.filterwarnings('ignore',
message=r'Module .*? is being added to sys\.path', append=True)